392018 Phylogenetik (V) (WiSe 2013/2014)
Contents, comment
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Die Rekonstruktion von phylogenetischen Bäumen ist eines der ältesten Arbeitsgebiete der Bioinformatik. In dieser Vorlesung werden mit klar algorithmischem Schwerpunkt traditionelle und neuere Verfahren zur Rekonstruktion von phylogentischen Bäumen behandelt. Themen werden u.a. sein:
- Diskussion der mathematischen und biologischen Grundbegriffe
- Formalisierungen des Baumrekonstruktionsproblems
- Merkmals- und distanzbasierte Rekonstruktionsalgorithmen
- Statistische Modellierung von Evolution und Maximum-Likelihood-Baumrekonstruktion
- Bewertung der Qualität von rekonstruierten Bäumen
Bibliography
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J. Felsenstein. Inferring Phylogenies. Sinauer, 2004.
R. D. M. Page, E. C. Holmes. Molecular Evolution: A Phylogenetic Approach. Blackwell, 1998.
D. Graur, W.-H. Li. Fundamentals of Molecular Evolution. Sinauer, 2000.
D. M. Hillis, C. Moritz, B. K. Mable. Molecular Systematics. Sinauer, 1996.
M.A. Steel and C. Semple. Phylogenetics. Oxford University Press, 2003.
External comments page
Teaching staff
Dates ( Calendar view )
| Frequency | Weekday | Time | Format / Place | Period | |
|---|---|---|---|---|---|
| weekly | Mo | 14-16 | U10-146 | 14.10.2013-07.02.2014 | |
| one-time | Mo | 14-16 | C0-116 | 09.12.2013 |
Examinations
| Date | Time | Format / Room | Comment about examination |
|---|---|---|---|
| Monday, February 10, 2014 | 14-16 | H11 |
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Subject assignments
| Module | Course | Requirements | |
|---|---|---|---|
| 39-Inf-SAB Spezielle Algorithmen der Bioinformatik | Ausgewählte Vorlesung zu Spezielle Algorithmen der Bioinformatik | Graded examination
|
Student information |
The binding module descriptions contain further information, including specifications on the "types of assignments" students need to complete. In cases where a module description mentions more than one kind of assignment, the respective member of the teaching staff will decide which task(s) they assign the students.
| Degree programme/academic programme | Validity | Variant | Subdivision | Status | Semester | LP | |
|---|---|---|---|---|---|---|---|
| Bioinformatik und Genomforschung / Bachelor | (Enrollment until SoSe 2011) | Spezielle Algorithmen | Pflicht | 5. | 4 | benotet | |
| Bioinformatik und Genomforschung / Promotion | Indiv. Erg. | 4 | |||||
| Graduate School in Bioinformatics and Genome Research / Promotion | 4 | ||||||
| Informatik / Bachelor | (Enrollment until SoSe 2011) | Nebenfach | Spezielle Algorithmen der Bio | Wahlpflicht | 5. | 4 | benotet |
| Naturwissenschaftliche Informatik / Bachelor | (Enrollment until SoSe 2011) | Spezielle Algorithmen | Wahlpflicht | 5. | 4 | benotet | |
| Naturwissenschaftliche Informatik / Diplom | (Enrollment until SoSe 2004) | BioI | Teilleistung mündliche Prüfung möglich HS | ||||
| Naturwissenschaftliche Informatik / Master | (Enrollment until SoSe 2012) | Spezielle Algorithmen | Wahlpflicht | 1. | 4 | benotet |
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