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Cultivated scallops populations develop distinct genetic structure

Published 10. Februar 2017, 15:17 h

Biologists at Bielefeld University publish analysis

The scallop is one of the largest edible molluscs, and gourmets consider it to be a great delicacy. To meet this demand, the fishing industry cultivates these shellfish in coastal aquafarms. In a new analysis, behavioural ecologists at Bielefeld University have confirmed that cultivated scallops developed their own genetic structure that differs from that of natural scallops. The biologists studied a total of nine populations of scallops (Pecten maximus) along the coast of Northern Ireland. They are presenting their results this Wednesday (8.2.2017) in the research journal ‘Royal Society Open Science’.

Der Verhaltensökologe David Vendrami von der Universität Bielefeld untersucht, wie sich Populationen der Jakobsmuschel unterscheiden. Foto: Universität Bielefeld
The geneticist David Vendrami from Bielefeld University is studying ways in which populations of scallops differ. Photo: Bielefeld University
‘Of the nine scallop populations studied, only one shows a marked genetic difference from the others and that is the artificially cultivated type,’ reports Joseph I. Hoffman, head of the Molecular Behavioural Ecology research group. New breeds are cultivated in, for example, mesh cages in coastal waters. Now and then, young scallops escape through the mesh and are thereby able to impact on natural populations. Biologists use the term population to describe a group of organisms of one species that live together in one area and are linked together genetically through reproduction over successive generations.

The researchers analysed the genetic architecture of the mollusc populations. ‘Studying the genetic architecture of animal populations helps us to understand which external appearance an organism can adopt – for example, how large a mollusc can become or whether it can develop red streaks on its surface,’ says David Vendrami. The doctoral student has analysed a total of 180 mollusc samples. The Agri-Food and Biosciences Institute in Belfast (Northern Ireland) collected these in February 2015 during an excursion along the Northern Irish Atlantic coast.

The researchers have not just confirmed how breeding affects scallop populations. Their study also confirms that these molluscs adapt their shape and internal colouring very flexibly to conditions in their environment, and that they do this independently of whether they belong to the one cultivated or the eight natural populations. ‘We have tested how far genes relate to appearance. However, that is very probably not the case. It is highly likely that the external characteristics of the molluscs depend on their surroundings,’ says Vendrami.

Für die Studie haben Bielefelder Forscher das Aussehen und das Erbgut von 180 Jakobsmuscheln von der Küste Nordirlands analysiert.  Foto: Agri-Food and Biosciences Institute, Belfast
For this study, researchers at Bielefeld analysed the appearance and the genes of 180 scallops from the coast of Northern Ireland. Photo: Agri-Food and Biosciences Institute, Belfast
Scientists at Bielefeld also used this study to compare a classical DNA analysis with a new procedure. The classical analysis proceeds by evaluating repeated short DNA sequences (microsatellites) in order to compare samples from different organisms. The modern procedure (RAD sequencing) takes less time to analyse thousands of times more DNA sequences. ‘The new procedure is markedly better at finding differences in the populations than the classical approach,’ says David Vendrami.

In their future research, Hoffman, Vendrami, and their colleagues will be going beyond Northern Ireland and studying samples along the entire Atlantic coast from Norway to Portugal as well as in the Mediterranean. Their aim is to find out how scallops as well as other crustaceans react to different environmental conditions in terms of their growth.

For the current study, researchers at Bielefeld cooperated with a series of partners: the University of Cambridge (England), der University of Duisburg-Essen, the British Antarctic Survey research institute (Cambridge), and the Agri-Food and Biosciences Institute in Belfast (Northern Ireland).

David Vendrami is a member of the Marie Skłodowska-Curie action ‘Calcium in a Changing Environment’ (CACHE) in which ten doctoral students of different disciplines from all over Europe are studying Europe’s commercially most important molluscs. The action is being funded by the European Union. Marie Skłodowska-Curie actions are part of the European Union’s Framework Programme for Excellent Research and Innovation.

Original publication:
David L. J. Vendrami, Luca Telesca, Hannah Weigand, Martina Weiss, Katie Fawcett, Katrin Lehman, Melody S. Clark, Florian Leese, Carrie McMinn, Heather Moore, Joseph I. Hoffman: RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity. Royal Society Open Science, http://dx.doi.org/10.1098/rsos.160548, published on the 8th of February 2017.

Further information is available online at:
Shellfish study published this month (uni.news on 28.6.2016): https://ekvv.uni-bielefeld.de/blog/uninews/entry/shellfish_study_published_this_month

Contact:
David Vendrami, Bielefeld University
Faculty of Biology
Telephone: +49 521 106-2725  
Email: david.vendrami@student.unife.it

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